How to use gmx_clusterByFeatures?

It contains several sub-commands for different purposes.

Other tools are presently in development.

List of sub-commands available in gmx_clusterByFeatures
Command Function
cluster Main module to perform clustering
featuresplot Feature vs Feature plot to check quality of clustering
distmat Distance-matrix related calculations
matplot To visulaize/plot matrix obtained from distmat
hole To calculate cavity/channel radius using HOLE program
holeplot To calculate average and plot hole output radius file
holefeatures To write radius as a features for clustering
holeclustersplot To plot or write radius for clusters separately